SequenceAnnotation equals(Object) - Method in class .quence. SequenceAlignmentDocument.ReferencedSequence equals(Object) - Method in class .quence. DocumentNoteField equals(Object) - Method in class .quence. DocumentFieldAndValue equals(Object) - Method in class .documents. DocumentField equals(Object) - Method in class .documents. QueryField equals(Object) - Method in class .documents. Dialogs.DialogAction equals(Object) - Method in class .databaseservice. equals(Object) - Method in class .components. Options.OptionĬhecks whether two CharSequences contain the same sequence of characters. Options.MultipleLineStringOption createComponent() - Method in class .plugin. Options.LabelOption createComponent() - Method in class .plugin. Options.FileSelectionOption createComponent() - Method in class .plugin. Options.ExecutableFileSelectionOption createComponent() - Method in class .plugin. Options.EditableComboBoxOption createComponent() - Method in class .plugin. Options.DateOption createComponent() - Method in class .plugin. Options.ComboBoxOption createComponent() - Method in class .plugin. Options.ButtonOption createComponent() - Method in class .plugin. Options.BooleanOption createComponent() - Method in class .plugin. DocumentSelectionOption createComponent() - Method in class .plugin. createComponent() - Method in class .plugin. SequenceAlignmentDocumentĬreates a charSequence which uses a minimal amount of memory to represent the given charSequenceīy analyzing the contents and returning an appropriate CharSequence implementation. CombinedAlignmentAndSequenceDocument canSetFieldValue(int, DocumentField) - Method in class .quence.
DefaultAlignmentDocument canSetAnnotationsOnConsensus() - Method in class .quence.
SequenceAlignmentDocument canSetAnnotationsOnConsensus() - Method in class .implementations. CombinedAlignmentAndSequenceDocument canSetAnnotationsOnConsensus() - Method in class .quence. DefaultAlignmentDocument canSetAnnotations() - Method in class .quence. canSetAnnotations() - Method in class .implementations. SequenceAlignmentDocument.updateSequence(int, CharSequence,, NucleotideGraph, boolean) even if they return false from this method. Note that some alignment implementations may return true from SequenceAlignmentDocument.isEditable() and allow updating their annotations via Returns true if this alignment can have its annotations on sequences (including the consensus sequence) edited alone via tAnnotations(int,, boolean)Īnd tAnnotationsOnConsensus()
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